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… about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … massive problems just as much as it brings about massive data into really interesting ways to look at our systems. … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …

… The JGI’s Science Programs offer support to users and their research efforts.  JGI … of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for them. Their concerted … Deputy of Science Programs …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant Professor from the … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to …

… earlier this year. And today we have our conversation with Professor Alison Narayan, from the University of … in a route towards many different compounds in the same family. And so that you want it to have some promiscuity in … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …

… projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the … constraints, etc. of natural environments shape specific genomic signatures that could be used to hypothesize …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral …

… Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … sample processing and sequencing capabilities. The Genomic Technologies Group, which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the …