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Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … what happens. Dan: Very cool. Well, the word you’ve used multiple times today is fun. And I know, from working with …
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Primer and platform effects on 16S rRNA tag sequencing
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … compound is not the answer. Some cases, it’s actually multiple compounds acting in synergy which is scientifically …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy … Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
Learn more
Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop … discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a … Download plant, algal, fungal and microbial genomes and …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
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