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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the …

… The Genome Insider podcast brings listeners into the science … and fungi to microbes and viruses. Listen in to explore the data that illuminates biology, and hear how it could power …

… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … to better understand our broader community of users. Each portal lists a contact, or you can reach out via the form on our website.   … Looking for BBTools? Find it here.  …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC …

…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to … enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …

… data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … of the annotations and data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   … The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …

… I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of …

… As an Integrative Genome Science User Facility, the JGI plays a leadership … of complex biological, earth, and environmental systems for energy and infrastructure security. In complement to … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated …

… on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the Informatics Advisory Committee, the Plant Program User …