Search

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … to advance basic science by sequencing scores of microbial species as well as several model organisms and contributing …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so heterotrophic bacteria. Now, we … at archive.jgi.doe.gov/user-programs . Thanks, and see you next time!  … Episode Transcript …   … This is the first …

… stable? And those are important to us before we ask those next questions of will it work on many different substrates? … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … robot, which is essentially a little arm with a multi-channel pipette and you can write a program that tells …

… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … updateable transcriptome resource spanning diverse plant species. It was developed to improve plant genome … time course data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

The Facilities Integrating Collaborations for User Science (FICUS) … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to …

And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … the metabolome into well plates. And we can use our fancy multiplexed activity metabolomics method to tell us what’s … So happy to see you. And looking forward to the next couple of days of the conference. BRIAN BACHMANN: …

… to the idea that you could go internationally to do the next stage of your training and that there might be more to … than the ones under which you analyze your sample, then the comparison may not be that relevant, but also the amount of … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

Right. Kate Duncan: And Pseudonocardia . And we’ve got new species which we’re currently in the process of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

Miscanthus  sequence offers insights into benefits of polyploidy and … of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … M. sinensis and a tetraploid M. sacchariflorus , another species of Miscanthus that was sequenced. Understanding the …