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… of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve … annotations, and function distribution. These are derived from isolates and single cells. This effort uncovers novel … sequencing of micro-eukaryotes directly isolated from environmental samples.  …

… interactions and functions that shape ecosystems. By decoding the microbial DNA in natural environments, the … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …

… week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … it turns out that a lot of natural products are built up from amino acids, so they’re secondary metabolite peptides. … when we went looking for a photo of John, we found one from the 70s in the Scripps library, and in it he’s got …

… we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this … And so there are different ways that we decided which sequences made it onto that list. So the majority of them are natural sequences. And so we built a library that was densely …

… A fungus relies on bacteria to regulate key components of its … as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a parasitic interaction with their soil fungus host, …

… specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … break down the components of plant cell walls, which range from simple to complex carbohydrates, and then convert them … the activity, expression and regulation of protein-coding genes. This first paper integrating multi-omics data …

… for amplifying the JGI’s impact. Data generated from a single investment will be reused for further … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … in the context of reference isolate genomes included from the IMG/M system. …

… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … of life. Tools are provided to display annotation data from many common software tools, and from many users, so …

… habitat. The Science By comparing genetic information from similar organisms, researchers have gained insights on … and bioproducts. This study lends insights on how the fungus has responded to manmade changes in its ecological … of two strains of fungi Serpula lacrymans – var. lacrymans from Europe and var. shastensis from North America – against …