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… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so heterotrophic bacteria. Now, we … about terms and so I will probably end up interchangeably using the term secondary metabolite and specialized …

… JGI’s calls for proposals , and submit your proposal online using the Work Initiation Process (WIP) interface.    For … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public projects on the JGI Genome Portal . The PI and all authorized users can also …

… Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… work as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … the help of JGI’s DNA synthesis grant. And that having a whole panel of these enzymes allows us to ask the questions …

… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … 100 kb versus 500 kb. In the lab, they’re going to do the whole set at one time. So it’s better to have really more, …

… The Genome Insider podcast brings listeners into the science …

… ecologists that they needed to consider chemical impact on species interactions, communication, that kind of thing. But … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … we have to devise our own culture media. So we started using a whole bunch of polysaccharides. We cultured things …

… system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a …

… project at any time by logging on to the My Data Portal using your JGI login . After sequencing/metabolomics has … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… Our lab is using mass spectrometry based metabolite profiling to … direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … profiles from diverse biological and environmental samples using advanced liquid chromatography mass spectrometry … soil, lake).  A wide range of metabolites are identified using LC-MS/MS methods optimized for specific types of …