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DOE Metrics
… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY …     2,164     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental problems.  The mission of … as needed), and the work plan is written into a Statement of Work document. …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as … to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science … lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes … Episode Transcript … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global research community in studies of complex biological and environmental …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Emiley Eloe-Fadrosh
… 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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