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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a … The majority of JGI projects come from the user community. Find out about …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some … This is the first episode of Natural Prodcast, a podcast produced by the US Department …
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User Support
… Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … after realizing that enzymes were specific for their substrates, that you couldn’t buy– there wasn’t a encyclopedia of …
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