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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science … recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes …
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Natural Prodcast Episode 9: Roger Linington
Institution of Oceanography. Roger was splitting his time between Bill Gerwick’s lab and doing research in Panama … ultimately what needs to happen if we’re really going to understand the chemical diversity and chemical utility that … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Community Science Program
… from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for … by the JGI at no cost to the user. … All proposals first undergo technical review by JGI staff, while the DOE ensures … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Natural Prodcast Episode 7: Ben Shen
… he has an accent, and, so, I don’t really have any trouble understanding him, but I know from the download stats that … and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a perfect storm in … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… that makes up an individual’s genome. The genes of sorghum plants are likely responsible for the crop’s ability to … by drought is associated with the symbiotic relationship between plant roots and arbuscular mycorrhizal fungi (AMF), … gene expression in that set, implicated in AMF interactions, was dramatically reduced as a result of …
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FICUS Overview
… science experiments in ways they couldn’t with projects undertaken separately at individual user facilities. A … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical review by JGI staff as well as staff at …
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User Support
… access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science … relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to … the ability to adapt to different environments were deeply rooted in the common ancestor of algae and land plants. The …
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John Vogel
… abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his … study shows highly reproducible physiology and depletion of soil metabolites by a model grass New Phytologist 222: … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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Environmental Genomics Group
… capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem … Team    … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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