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Hi-C metagenome sequencing reveals soil phage–host interactions
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours … DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators (PIs), Co-PIs, and …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login … Submission before they can receive an emailed Approval to Ship Samples that will be subject to the DOE JGI’s … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 5: Brad Moore
… Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of … Institution of Oceanography. (Courtesy of B. Moore) DAN: This is the second of our conversations recorded at the SIMB … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to … them through the process of working with our facility. This includes help with: preparing a Statement of Work, … completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers … Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Fungal & Algal Program
… explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … in carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic potential into …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal symbiotic …
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Events
…  Learn about meetings the JGI is hosting:   … Viral EcoGenomics & Applications (VEGA)  … The JGI is represented at conferences year round; find out where our researchers will be … about upcoming user-focused webinars and workshops we're hosting. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life … and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 …
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