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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the … role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. … of natural compounds that support disease resistance, with applications in sustainable agriculture, including the …
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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Enzymatic carbon–fluorine bond cleavage by human gut microbes
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … prior to shipment to the  JGI. The documents below (posted with permission) demonstrate the importance of proper …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and … order by the reviewers. The ranked proposal list, along with a recommendation from JGI management, is then forwarded … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical … and dynamic metabolite networks of environmental microbes and how they transform their environment. Research … For further details, please reach out to the Group Lead …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock … The Fungal & Algal Program harnesses cutting-edge sequencing … carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an … gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced … of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … drug discovery train moving, drug companies started working with some techniques referred to as “combinatorial … as there were natural product hits. Sort of in parallel with that, the field of molecular biology got more …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Getting to the core of the gut microbiome
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