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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, … and our collaborations to sequence that collection, mine genomes, and develop new technology to access natural …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in … and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning …
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DOE Metrics
… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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JGI@25: From Life at the Extremes to Editing Genomes
… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a … The majority of JGI projects come from the user community. Find out about …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … .  Many users rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, … Deputy of Genomic Technologies …
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Fungal diversity and function in metagenomes sequenced from extreme environments
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