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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Frequently Asked Questions: Proposal Submission
… proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 16: Marcy Balunas
And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T
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Complete genome sequence of Mesorhizobium australicum type strain (WSM2073T)
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Frequently Asked Questions: Project Management
… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …
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Natural Prodcast Episode 15: Katherine Duncan
… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Plant Program
… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
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Complete genome sequence of Mesorhizobium ciceri bv. biserrulae type strain (WSM1271T)
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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