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… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of … pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … is what those would be. The work that we do at larger scale in order to look at the chemistry a little bit more …

The Micro-Scale Applications group explores the genetic makeup of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … connect genes and infer changes in gene function across the phylogeny — and link these into our DOE crop plants, so we …

Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship … was an opportunity to adapt my existing skill set to a new scale, which presented a host of interesting and ultimately … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …

Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal genomics and PhycoCosm portal. Dr. … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …