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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for … The majority of JGI projects come from the user community. Find … The “User” signing the JGI User Agreement will be an authorized representative from your …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal … submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small … them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … as needed), and the work plan is written into a Statement of Work document. …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … Episode Transcript … This is our conversation with Professor Ben Shen, from The Scripps Research Institute (TSRI) … and our collaborations to sequence that collection, mine genomes, and develop new technology to access natural …
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High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick … The Deputy of Genomic Technologies serves as the JGI’s primary point of …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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