Search

… an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user … and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …

… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …

… atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … … most efficient method of converting abundant low-cost gas feedstock into valuable bioproducts, but many  Clostridium … Office (IPO) and read the Guide to Partnering with DOE’s National Laboratories . … Recent Partnerships … The …

KBase integrates a variety of data and analysis tools, from DOE and public resources, into an easy-to-use platform that … … What is MycoCosm? … Myco-Ed Partnerships … Are you or your institution interested in becoming part of Myco-Ed? Contact Stephen Mondo to sign up. …

… or the submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities … Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …

… scientists to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central … decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …

… facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique … will be the development of tools and infrastructure for microbiome data science, and the development of new … modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data …

… functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical … the other participating facilities, is then forwarded to DOE for final approval.  Following DOE approval, project …