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… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species …

… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … Program through a proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the …

… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … technology to help access complicated natural product gene clusters, and we’re all really excited about that, and … This is our conversation with Professor Ben Shen, from The Scripps Research Institute (TSRI) …

… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … sequence-based methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better …

… UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … should contact Christa Pennacchio in the Project Management Office If you have questions about project relevance or …

… In honor of the JGI's 25th anniversary in 2022, we have … previously unseen — is, in fact, a microscopic water mold, genetically related to such aquatic species as diatoms and … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …

… Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… Describing the largest analysis to date of the modified DNA base … antagonistic. In fungi, 5mC is often found in transposable elements or transposons that can move to another location in … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop … critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for … for technical help, feedback or a guided walk-through of the new Data Portal.  …