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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … into our integrated microbial genomes system, which is our comparative analysis system. Once that is completed, the …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … been a sort of evolving trajectory. I think, you know, most scientific careers are like that, in that they they … arc. And so, you know, definitely there has been a strong evolution in terms of the way the group thinks and that the …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … was episode 6.] about this. And really his focus was on the evolution of these systems and I understand you’ve worked on …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Switchgrass has a large polyploid genome, which means most genes are found as multiple copies across the … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission … any institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … which ones express the best in E coli? Which ones are the most thermally stable? And those are important to us before … AU.  2023.   doi: 10.1021/jacsau.3c00263 “Deciphering the evolution of flavin-dependent monooxygenase …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … gene expression, providing deeper insights into functional genomics. A key focus is understanding the interactions …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … metabolites all refer to the chemicals that make species unique and different from one another. They are … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan …
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Comparative Genomics Analysis of Trichoderma reesei Strains
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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