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Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 16: Marcy Balunas
… a postdoc and then a job.” Instead I got interested pretty early on regarding cancer medicines and I didn’t really know … strain and there have been years and years and years about 35-ish years, I think, now, studying Vibrio fischeri and … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … the annual CSP call. That call is supposed to come out in early next year. Same for the FICUS, we’re working with EMSL …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … who offer perspectives on what the next five years of innovation could look like. In one article, Micro-Scale … and Roux are part of the first cohort to receive Early Career Development awards as part of the …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … Dan, when you were supposed to visit us in the Netherlands early this summer, then it was– well, I think the day your … that I was exchanging with people. So I think I wrote 3,000 emails in the course of one and a half year while …
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Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes
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Natural Prodcast Episode 21: Elizabeth Parkinson
… different pieces of her work, including bacterial quorum sensing and its effects on regulation of natural product … spec seeing different levels go up and down. We're pretty early on in that project. I will fully admit that, but it's … thioesterases, we were actually able to find approximately 300 with NRPSs nearby. And of those once we did the …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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