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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… and also talk about some of the great science that he does. So welcome to the show Paco Barona-Gomez from the … described it, I thought of primary metabolism as being the standard set of shared reactions that most living organisms … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … scientists to drive innovations that align with DOE's missions. …
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Natural Prodcast Episode 16: Marcy Balunas
… I didn’t know how to get towards that.  Organic chemistry doesn’t really help with getting to something other than the … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … to that here in North America. ALISON:  Yeah, and it does sound like your career has incorporated a lot of … of researchers in the field. And they were able to define standards for the minimum information that should be …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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FICUS-NERSC/KBASE
… ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …
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