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… metabolite peptides. And there are two ways that nature does this. The more well-known secondary metabolism systems … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . … 8(1):1424. Sczyrba A, et al. (2017) Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … check it out. You can get more info at usermeeting.jgi.doe.gov . And I’ll be sure I put that link in the show … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER … provide an award number and contact information for their DOE program officer.  Submitters are strongly encouraged to …

… special way to be able to hang out with a parent who then doesn’t become your parent anymore, but has this other role … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …

… management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ management teams on how to …

… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The JGI leverages its existing partnerships and develops others … support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy … Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number … pathogen and trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …

The human-centered, agile collaboration between the JGI and the information technology company Truss has … … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … is committed to advancing genomics in support of DOE missions related to clean energy generation and …

… up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …