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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … for multiple applications The planet’s microbial diversity is immense, yet much of it remains unknown. For … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically …
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Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and …
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Hiroshi Otani
Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … understand that a little bit better, with some advances in evolution and cell biology. I’m interested in that. And we …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … families, and pathways, enhancing our understanding of evolutionary diversification and microbial diversity. Learn …
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Natural Prodcast Episode 17: Cassandra Quave
I’m talking about is called the Convention on Biological Diversity . And there’s something called the Nagoya Protocol … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … mixed powders, my immediate thought was this is going to revolutionize plant natural products work. And I’m always …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant …
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