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Natural Prodcast Episode 5: Brad Moore
… or a seaweed, were just having just remarkable chemical structures and things that people hadn’t seen. For every … Going to the laboratory and opening them up and looking at their chemistry was a pretty magical period of time. So that … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . …
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Natural Prodcast Episode 19: Bill Fenical
… everybody else started looking at things and doing chemical structures, learning a little bit about things. And that was … microbes evolve, they evolve to make molecules that improve their survival. Those molecules, over evolutionary time, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Plant Microbial Interactions Group
… function of these phage genes is the modulation of their bacterial host to colonize plant roots, as with … Selected Publications …
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iPHoP: A Matchmaker for Phages and their Hosts
… has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With … However, matching these viral genetic sequences to their hosts is crucial to understanding what these viruses … multiple predictions to reliably match viruses with their archaea and bacteria hosts. The Impact Within the …
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Natural Prodcast Episode 22: Alison Narayan
… trained in synthetic chemistry as were you and then made their way into the field of natural products in some way, … attraction to natural products was dual, the beauty of the structures and also the challenge and thinking about making … more about what it can do, and as chemists take those structures as inspirations to really start making other …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its … reliably reflect the broader evolutionary relationships among fungal species. The team also found evidence that in …
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are … the JGI. From these assemblies, complete or near-complete population genomes were recovered—termed …
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DNA Synthesis Program
… constructs are subsequently synthesized and tested for their ability to produce desired chemicals. … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric …
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User Support
… https://signon.jgi.doe.gov ). Once users are notified that their proposal has been accepted, the PMO will assist with … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Population structure of an Antarctic aquatic cyanobacterium
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the … as well as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and …
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CSP Functional Genomics
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