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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … what we’re calling a Primer. We wanted to try and give a general audience some of the basics of natural products … JGI produces to try to find and identify natural product biosynthetic gene clusters and to do research to get a …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There …
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Metabolomics
… system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … observe novel, membrane-bound compartments that contain DNA clusters. He dubbed these organelles “pepins,” after the …
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IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … sequence and what comes out of it, if you start looking at biosynthetic gene clusters, you may find a wealth and some …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: … rich, and you can really just learn so much, which then enables you to ask bigger questions and accomplish bigger, …
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Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration
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