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Sequencing Technologies & Products
… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … large-scale liquid handling automation, and sequence analysis. … An assay used for profiling transcription factor binding sites across entire …
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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DOE Metrics
… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There … 8734 2005 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …
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Natural Prodcast Episode 18: A CSP Primer
… to offer you. So there’s a lot of– we also have a lot of analysis pipelines, be it for, again, metagenome, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … into our integrated microbial genomes system, which is our comparative analysis system. Once that is completed, the …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and … comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews Microbiology of nearly … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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Comparative Genomics of the Pine Pathogens and Beetle Symbionts in the Genus Grosmannia
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with … lineage. So there is no doubt that if you look into all the Streptomyces of a particular part of the Streptomyces …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these … Natural Prodcast is proud to welcome Professor Brian Bachmann, from the Vanderbilt Chemistry …
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