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Natural Prodcast Episode 15: Katherine Duncan
… I came back and I worked on an EU project, the Scottish Association for Marine Science. And then I started my own … the biosynthesis and the chemistry and those are all really closely related things in terms of, like, evolution, in … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … MARC: That is a perfect way to put it. ALISON: She’s an international ambassador? MARC: Yeah, I believe it was 2012 when … Oh, yeah, I think that I think that’s good. I mean, it’s closer to what actually happens in nature. MARC: Yeah, and …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a genome miner and has been involved … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … downloading this from countries all over the world – as many from outside the US as inside – and so, especially if … I’m very happy to talk to you. And so this is the third international meeting on natural products, but as a new, I call …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … in the title of my talk, 100% fair for you to make that association. DAN UDWARY: So I guess what is the conceptual … because I have this question, we have this discussion internally in my group quite frequently. OK, so imagine this …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … itself, it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … binding, we build a lot on DAP results. We also employ RNA-Seq and diverse in silico approaches for reconstructing …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … evolutionary conservation; and integration with single-cell RNA sequencing reveals how transcription factors control … plant resilience and adaptability. By analyzing data from many species side-by-side in a single multiplexed …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our …
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A Single Nucleotide Change in the polC DNA Polymerase III in Clostridium thermocellum Is Sufficient To Create a Hypermutator Phenotype
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team …
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