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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … double bonds in this one region of the molecule.  Dan: Big, complex molecule.  Brad: It was a complex chemical. Yeah, … a little bit more difficult. And so getting out clean DNA can also be a challenge there too. So JGI we really have …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … the Arizona Genomics Institute where high molecular weight DNA is extracted from samples, which is then sent to the JGI … can analyze their own data alongside public data, using a variety of open-source bioinformatics apps and …

Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … to this call may be submitted to the JGI at any time using a simple web-based form and are reviewed annually. For …

The mission of the Joint Genome Institute is to serve the scientific … performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and … environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … for these datasets. As part of a larger microbiome data integration hub, these datasets are searchable from the …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … developing new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …