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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …
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Plant Microbial Interactions Group
… is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of … Selected Publications …
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Natural Prodcast Episode 4: Nancy Keller
… So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … your talk today. It was another great example of probing fungi for natural products and finding new things. And so, … very interested in toxins – phytotoxins – produced by fungi. But the key seminar that tied everything back to the …
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Plant Program
… Plant Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory … methods, and delivering scalable transformation services through a user-facility model.  doi: 10.2172/3014442 … EcoFABs link genome biology to ecosystem processes through model laboratory ecosystems. They are small plastic …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … explore viral genetic diversity toward innovative biotechnological and industrial applications. Videos from … Life to New Functions. The seminars focus on experimental innovations, computational advances, and other technological …
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Mapping the Earth’s Hidden Fungal Kingdom
…     Over the past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations across different classes of fungi. “The enormous …
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Community Science Program
… the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the … of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome … Projects will be chosen based on scientific merit, judged through independent peer review, and evaluated based on …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover just above. … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was …
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Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … to synthesize codon-optimized fungal genes for various biotechnological purposes,” he said. To enable such … it to such a large data set, but also went all the way through to convert her biological observations into a …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon … research on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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JGI Portals
… Help Site for additional information, including a Login Walkthrough and FAQ . … calendar for technical help, feedback or a guided walk-through of the new Data Portal.  … and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced …
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