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Better Genome Editing for Bioenergy
… The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … work? The project was a multi-institutional effort led by then-graduate student Cory Schwartz and his advisor Ian … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … has been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … you can contact us on Twitter at @JGI or @danudwary , or by email to [email protected] . We’d love to get your …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … to the user. Most users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. Access to the …
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Natural Prodcast Episode 18: A CSP Primer
… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … Before we start, I realized in listening back to this and editing it that we used a few acronyms that you all might … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Genome Insider
… The Genome Insider podcast brings listeners into the science …
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is … merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of the …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for … to validate hypotheses generated from mining genomic data by designing and assembling physical DNA constructs that can …
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Development of a Recombineering System for the Acetogen Eubacterium limosum with Cas9 Counterselection for Markerless Genome Engineering
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so …
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FICUS Overview
… Facilities into their research. In recognition of the increasingly collaborative and multidisciplinary nature of DOE … and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … payloads, such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … we don’t recognize, because the only way to find things is by comparison. We’ll talk about that when we talk about …
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