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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Natural Prodcast Episode 17: Cassandra Quave
… culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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JGI@25: The Little Alga That Could
… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … on 598 individuals. Schmutz and his team assembled and annotated the genomes at HudsonAlpha. Sujan Mamidi and Adam …
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Natural Prodcast Episode 16: Marcy Balunas
And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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Refining the Process of Identifying Algae Biotechnology Candidates
Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … analysis effort for a more complete picture. The team annotated the algal genome and analyzed its metabolome to …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences … harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will focus on high-risk/high-payoff proposals within the focused topic … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Moderate High Temperature is Beneficial or Detrimental Depending on Carbon Availability in the Green Alga Chlamydomonas reinhardtii
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