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…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data …

… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … late great Warp Drive Bio, a biotech startup where we did genome mining together. Marc was the Head of Experimental … used to work at together called Warp Drive Bio, which was a genome mining company. So we’ll talk about those kinds of …

… The chromosome-scale genome sequence of trifoliate orange yields clues to … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern … remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and …

… willow and its close relative  Populus trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, researchers … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to …

… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … cylindrus . At that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar …

… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …

… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help … 5mC in fungi could help researchers find ways to protect poplar and other crops being considered for bioenergy …

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …