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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … department at the University of Utah, so that makes him one of Jackie’s colleagues. Aaron is doing some cool stuff … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … him, I was working on the natural product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific … kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon of the …
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Ancient Algae Reveal Secrets of Plant Evolution
… have enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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JGI Advisory Committee
… on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the Informatics Advisory Committee, the Plant Program User …
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Stop codon reassignments in the wild
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … accept this description, but I’d say that Alison is not one of the more normal kinds of natural products people we …
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Natural Prodcast Episode 1: The Primer, Part 1
… Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … on, let me know! All right, so here we go. This is episode one of the Natural Prodcast Primer!  — DAN: Hey, Alison.  … even  ALISON: Passionate few DAN: Yeah, maybe and I think one of the one of the fun things that I hope that I can …
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Natural Prodcast Episode 5: Brad Moore
… most of that out. But anyway, here’s our conversation with one of my favorite human beings, Brad Moore. — Dan: How do I … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . …
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Driving through stop signs: predicting stop codon reassignment improves functional annotation of bacteriophages
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The Power of One, Amplified
… approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … is akin to the structure of social media networks where one social media group may have a relatively constrained set …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples … for the appropriate contact name, email address and phone number for the signing official. User Institutions with … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial institution …
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