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AmiGO: online access to ontology and annotation data
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … (SIMB) Natural Products meeting earlier this year. And today we have our conversation with Professor Alison … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Plant Program
… challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … in the day. It’s kind of like, what are you going to find today? DAN UDWARY: Very cool. All right. Good, good. JACLYN …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … flow through and transform in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, …
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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