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… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … Yeah. Yeah. One of the things that I have observed in the past is that it seems like a lot of natural products are …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …

… Phytozome workshop held during the June 2022 CROPS Conference at the … Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …

… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … away from the ocean. Microbes. We’ve done those in the past, but the DOE mission changes over time. Yeah. We don’t …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as …

… powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … polysaccharides. We cultured things with fish meal, seaweed paste. I mean, we tried really hard to think about what … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) … and embargo policies. Use-restricted data: In past data policies, data were publicly visible in JGI …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We …

… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that …

… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Tiny Earth is using to be different than screening in the past, is in the types of pathogens or challenges where we’re … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … And then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did … Yeah, that was a really fun project. So we got the Joint Genome Institute interested in a marine obligate …