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Natural Prodcast Episode 19: Bill Fenical
… powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … polysaccharides. We cultured things with fish meal, seaweed paste. I mean, we tried really hard to think about what … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Microbiome Data Science Team
… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … et al. (2016) Microbiome Data Science: Understanding Our Microbial Planet. Trends Microbiol. 24(6):425-7. …
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Offerings & Capabilities
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JGI Workshop at SIMB NP Meeting
… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … And then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did … Yeah, that was a really fun project. So we got the Joint Genome Institute interested in a marine obligate …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Tiny Earth is using to be different than screening in the past, is in the types of pathogens or challenges where we’re … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Plant-Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Natural Prodcast Episode 15: Katherine Duncan
… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … of new chemistry, and we want to understand the antimicrobial-resistant era, we need new chemistry. If we want …
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Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past
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