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FICUS Overview
… of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the … technical feasibility and readiness to begin work.  During scientific peer review, proposals are evaluated and placed …
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Natural Prodcast Episode 6: Marc Chevrette
… perspectives on evolution of natural products biosynthesis. I think it will be fun to be able to provide a … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Partners
… the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. … facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data infrastructure …
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Natural Prodcast Episode 21: Elizabeth Parkinson
And so that's how I got interested in natural product biosynthesis. I then went on to do a postdoc with Bill Metcalf, … as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, they essentially make it not possible for the RNA …
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Plant Program
… the environment. At its core, the program investigates photosynthesis — the process that transforms solar energy into … for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …
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Micro-Scale Applications Group
… quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards to … The JGI provides users access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the …
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Natural Prodcast Episode 17: Cassandra Quave
… “ethnobotany.” And for the audience, ethnobotany is the scientific study of the ways that people interact with … that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
Learn more
Metagenome Program
… functions that shape ecosystems. By decoding the microbial DNA in natural environments, the Program provides a snapshot … is to develop a deeper understanding of microbial community assembly and microbial interactions, including … phylogenomic novelty: Advances in metagenomic sequencing, assembly and binning have enabled reconstruction of complete …
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Natural Prodcast Episode 11: Marnix Medema
I talked about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, … least parts of the structures of the molecules that use biosynthesis is encoded by these gene clusters and figuring out … think there is a lot of things that we can learn from that scientific community, and of course, hopefully they can …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell … synthesis superpower. Through a series of case studies, JGI scientific users share how they’ve worked with the JGI DNA … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Natural Prodcast Episode 5: Brad Moore
… looked under provide a new chemical entity, and the area of synthesis, the area of discovery, was just budding in the … think that was the first perhaps the only case of a genome assembly being aided by a chemical entity. Dan: Yeah, we … a little bit more difficult. And so getting out clean DNA can also be a challenge there too. So JGI we really have …
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JGI Portals
Our data platforms are a key resource for the broader scientific community and require constant developments to …
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