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Natural Prodcast Episode 3: The Primer, Part 3
… 80s and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic … the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of …
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Natural Prodcast Episode 11: Marnix Medema
… I talked about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, … it was supposed to be her room now but, well, it became my office due to the pandemic. And she’s sleeping in our … the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… that people are using in the clinics were kind of kidnapped from nature without paying attention to the … the US Department of Energy Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …
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Secondary Metabolites Program
… by exploring the genetic pathways responsible for their synthesis. The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics capabilities to … (BGCs), advancing pathway analysis, optimization of cell- and cell free-based expression platforms, tools and …
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JGI Portals
… for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Who We Are
… of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … metabolomics through its data portals. Supported by the DOE Office of Science's Biological and Environmental Research … HudsonAlpha Institute for Biotechnology , and the Arizona Genomics Institute. We are located in the Integrative …
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Natural Prodcast Episode 12: Nadine Ziemert
… miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports … the US Department of Energy Joint Genome Institute, a DoE Office of Science user facility, located at Lawrence … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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Natural Prodcast Episode 19: Bill Fenical
… why it’s so hard to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into … of California San Diego. I walked into the director’s office, asked him if I could speak to him. And I said, you … We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready to send …
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Natural Prodcast Episode 4: Nancy Keller
… to begin with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I … the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …
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Metabolomics Program
… and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … gene expression, providing deeper insights into functional genomics. A key focus is understanding the interactions … instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics Program is …
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