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Micro-Scale Applications Group
Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working …
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Project Management Office
… facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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Tanja Woyke
… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-437. Hess et al. 2011. Metagenomic …
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Machine learning sheds light on microbial dark proteins
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Game On: High School Students Drive Everglades Metagenomics Study
… partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … cycle. During regular web conferences, various JGI subject matter experts walked the class through the workflow and all …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you …
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A Powerful Technique to Study Microbes, Now Easier
Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … And these were not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … Schaefer . So we’ve been friends ever since. She’s a senior scientist who works with Pete. And they were really …
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