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FICUS-NERSC/KBASE
… is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … to DOE for final approval.  Following DOE approval, project managers negotiate project specifics with PIs (including JGI scientists as …
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Natural Prodcast Episode 17: Cassandra Quave
… in the School of Medicine and College of Arts and Sciences. She’s an ethnobotanist and the herbarium curator … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in …
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User Advisory Committees
… on JGI policies and practices that affect users and their science including technical capabilities offered, proposal … and scientific relevance and quality. … The DNA Synthesis Science Advisory Committee is chartered to offer advice, … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …
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JGI@25: Using Team Science to Build Communities Around Data
… our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. The 1KFG project represents affiliations at over 180 organizations in … Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. …
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Natural Prodcast Episode 15: Katherine Duncan
… into secondary metabolites? Kate Duncan: So I always liked science in school. I wouldn’t say I was one of these people … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is …
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Natural Prodcast Episode 9: Roger Linington
… and that there might be more to be gained than just subject matter, by making that change. So I went to the University … and doing medicinal chemistry, doing development of projects on a project-by-project basis. And the more time … to try and create an open source database of all known microbial natural products. So if you think about natural …
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Natural Prodcast Episode 20: Brian Bachmann
… we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … pharmacological properties. So they’re new compositions of matter. So one of the problems with the erythromycins and …
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Operating Expenses
Research (BER), a program within the DOE Office of Science. …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … that are the most important to DOE mission and plant science. These species form the basis of plant research in …
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Secondary Metabolites Program
… chat”-style podcast about natural products and the science and scientists of secondary metabolism. As the JGI … Prodcast … Secondary Metabolites Program in Detail … Projects and Initiatives … Secondary Metabolites Program …
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SPRUCE-ing Up Science
… expertise, a combination of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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