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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded … for transcriptomic engineering. As one example, researchers who worked on the Hungate1000 project were able to provide …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… conifer needle microbiomes. The survey showed what these microbes are equipped to do on the leaf surface. More specifically, they found that microbial community composition and functional potential varied across tree … of needle-surface communities.  Part of the work was done through a summer project in the JGI-UC Merced …
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Corals in Hot Water Get Help From Their Microbes
… a coral host, a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help …
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Metabolomics
… The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental … mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well …
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Cultivating Symbiotic Antarctic Microbes
… The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to … global carbon cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon … conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In … rivers covering 90% of the watersheds in the continental United States. They also provided multiple access points to … Understanding the compositions of river microbiomes—who the core microbes are and what they do—can help …
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Meeting Code of Conduct
… entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an environment where everyone … inherent worth of every participant. We invite all those who participate to help us create safe and positive …
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Tracking the Origins of Methane-Producing Microbes
… of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. Department of … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at …
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable … of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI … as well as staff at the other participating facilities, who consider technical feasibility and readiness to begin …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to … mean they can’t do it, but they are inclined toward methanogenesis, at least in culture.” Another difference …
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is … include: Make recommendations to the JGI regarding calls for proposals, including focus areas, … qualifications, and terms of service Any investigator who has been an active user of the JGI at any time in the …
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