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Metagenome Program
… advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring …
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How to Submit Sequencing Samples
… on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the … DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting material is one of …
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Metabolomics Technology Group
… based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial … and dynamic metabolite networks of environmental microbes and how they transform their environment. Research …
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How To Use Our Systems
… … Information on Software Looking for information on our software, including BBTools ? Click to find that on our archive site.  …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … is metal in the hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an … effort. So I had a PhD student named Brian Wolff. He was looking at the invertebrate communities upstream and …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… studying anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to …
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Methane Makers in Yosemite’s Lakes
… lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those …
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Microbial Program
Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect … by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and … communities. This involves both experimental and computational exploration of uncultivated viral diversity, …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … beyond cataloging the genes of microorganisms and start making quantitative measurements that answer questions such … sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling strategies that allow us to …
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