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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature … editor for  Nature Reviews Microbiology, with an unusual opportunity: would JGI researchers consider regularly … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … of flavin independent monooxygenases with the help of JGI’s DNA synthesis grant. And that having a whole panel of … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or …
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Microbiome Data Science Team
… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , … a conversation from another UC Berkeley colleague, longtime JGI collaborator Jill Banfield. "It was 2006, and I was …
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Natural Prodcast Episode 18: A CSP Primer
… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … will be too. But, today, I got the chance to work with my JGI colleague Menaka Wilhelm, who is the host of JGI’s other … Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … a Genome Insider podcast minisode.) Since the JGI’s early sequencing of C. reinhardtii became available, data mined by … on an upcoming paper, discovered that in the original strain, a protein called RECQ3 helicase is entirely deleted, …
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Natural Prodcast Episode 3: The Primer, Part 3
… state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … who works in some kind of biological research has the opportunity to, you know, use that research towards …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and endosphere communities … functional networks and regulatory networks of a single strain of  Sinorhizobium meliloti .  S. meliloti is one of …
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JGI & KBase at PAG XXVII
Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you can use the KBase …
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