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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … enabling modeling of microbiomes based on functional traits. These advancements provide new insights into … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was … Previously, researchers had to apply to each facility with separate review schedules and selection processes, … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … (MIMAG) of bacteria and archaea. Nat Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching …
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Microbiome Data Science Team
… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … capabilities to help advance their science by generating data in three overarching categories: Sequencing, … Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable the JGI to …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their potential …
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. … the next few months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. …
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Frequently Asked Questions: Proposal Submission
You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls … go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users from certain countries …
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Natural Prodcast Episode 5: Brad Moore
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … because I was always swimming or surfing. And you know, 25 hours a day we’re at the beach practically. It was just – … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects … research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson … Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined … Kerrie Barry and Jeremy Schmutz worked with a community of switchgrass researchers to conduct a large-scale field …
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