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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … The GEBA initiative has also utilized a very large collection of type-strain isolates, provided by the Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, based …
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High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York
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High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … different, different structure types. We started amassing a collection of marine bacteria. We also studied fungi. We … But you know, those were not very prolific. We have a collection now of about 17,000 organisms we’ve isolated from …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … many different avenues toward chemistry. But that’s kind of where I had you. How would you describe what your … MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As much as …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, epigenetic analysis …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … for technical help, feedback or a guided walk-through of the new Data Portal.  …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and … Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out mutants for experiments. When the cyanobacterium loses this …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … same effect. Yet another approach is using the Hungate1000 collection to identify microbial markers that would allow … and breed low-methane producing animals. The Hungate1000 collection has also opened up research offshoots in totally …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. Poplar trees grow quickly in a variety of ecosystems and contribute to stabilizing streambanks, …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Center for Biotechnology Information (NCBI) GenBank collection and on the JGI’s  Integrated Microbial Genomes & …
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