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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … high-quality reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building … of switchgrass is available on the JGI plant data portal  Phytozome . This version can help breeders identify genomic …
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Special Initiatives & Programs
… use different plants both for laboratory research and for improving feedstock crops: Center for Advanced Bioenergy and … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of … genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and genetic …
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Natural Prodcast Episode 9: Roger Linington
… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … a podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … want to hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists …
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Improving genome assemblies by sequencing PCR products with PacBio
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Improving Microbial Genome Annotations in an Integrated Database Context
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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … ferns. The genome is available on the JGI’s plant portal, Phytozome . Researchers hope to have demonstrated the …
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … plant history.”   … 1KFG project on MycoCosm … OGG on Phytozome  … Filling in the Plant Tree of Life … Fungal …
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