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… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies …   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. …

… The JGI has diverse capabilities in: DNA and RNA sequencing, … based metabolomics Below is a table of standard product offerings, including a description of the product and … we encourage you to contact the relevant JGI  Science Program leads to discuss available options. Note: In 2021, …

… genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … the metabolic potential of uncultivated lineages is of high value to establish models and hypotheses, experimental …

… student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans accidentally eat it, … felt kind of like training for a marathon by running at a high altitude! And a lot of us moved on to work in simpler … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …

… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate students … she added, ”I’ve developed efficient skills in working with high performance computing and had an amazing opportunity to …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … Elucidating Sphagnum microbiome genetic interactions for …

… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory … through the links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …

… of these compounds, which, in turn, translate into a high chemical diversity. So that’s just the type of … systems. So, in those cases, it’s been, in the last five years, obvious that these are specialized metabolites. … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …

… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … have any questions, please contact your Project Manager or jgi[email protected] . … collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control …

… least a certain level of similarity. So if similarity was higher than a certain kind of volume. And if you do that, … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … is, where do you think your lab is going over the next say five or 10 years? Sounds like function is a big part of …

… scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE … jointly support these missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …