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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look around the space, use the graphic rings to move about the … pointing device to zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor …
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Products
… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … change etc) and structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for expression profiling …
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A functional microbiome catalogue crowdsourced from North American rivers
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From Textbook to Real World Applications
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JGI@25: Using Team Science to Build Communities Around Data
… at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging …
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Crops as Tough as World Cup Turf
… In our warming world, we’ll need corn, sorghum and other crops to grow well … Torrres have looked into traits that could transfer from grasses into other crops.  One grass they studied just happened to be the same species that covered World Cup pitches in 2022.                     …
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FICUS
… FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project … The ranked proposal list, along with a recommendation from management at the JGI and the other participating … for FICUS Research describes the resources available from all the facilities participating in the FY25 call, …
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Publication Policy
… purpose of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …
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Offerings & Capabilities
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Homepage
… Our homepage video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the … isolated are preserved in the Culture Collection of Fungi from Extreme Environment, the Italian National …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … can enable studies of plant root microbiome and other microbiomes by providing reference genomes of the key …
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Examples: Successful LOIs & Submissions
… calls. These documents have been shared with permission from the PIs who drafted them.  …
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