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Making a Lichen Together
… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … And then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … late great Warp Drive Bio, a biotech startup where we did genome mining together. Marc was the Head of Experimental …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … that. JACKIE: So I guess when you get a new organism or a genome, let's say, and you're looking at clusters, is there …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies … Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology development and JGI user … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … them?    NANCY:  Yeah, okay. Of course. Fungi have a larger genome. The genetics was slower to begin with. So …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …
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