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Natural Prodcast Episode 18: A CSP Primer
… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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User Executive Committee Charter
… offered, proposal review procedures, and the annual user meeting. The UEC also acts as a liaison to the user … for session themes and speakers for the annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; Communicate …
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User Advisory Committees
… offered, proposal review procedures and the annual meeting. The UEC also acts as a liaison to the user … The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …
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Natural Prodcast Episode 7: Ben Shen
… genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … So, you may know the so-called Nagoya protocol, which prevents taking bio-resources from the native countries. So … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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Mission
… in studies of complex biological and environmental systems. We optimize our service to the community through … crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and … and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to recover, reuse, …
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Natural Prodcast Episode 20: Brian Bachmann
… and using engineered biosynthetic pathways and enzyme systems to do synthetic analoging of some really complex … And I’m also dying to talk in more detail about the JGI Secondary Metabolism Collaboratory , which is the big huge … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …
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Special Initiatives & Programs
… located in geographically distinct areas and use different plants both for laboratory research and for improving … of Illinois at Urbana-Champaign: Announced in July 2017, CABBI is a collaboration between Illinois’ Institute … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. …
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Frequently Asked Questions: Project Management
… sample and project metadata, and to access JGI tools and systems. … Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …
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JGI@25
… artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a … private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and …
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Supporting Global Research into Actinomycetes
… in soil and can be used as biocontrol agents and to promote plant growth. It is the largest genus within Actinobacteria … and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially … of Science User Facility, as well as a member of  its Secondary Metabolites research group . That group, led by …
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