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… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … of what you do then? And are there ways to do data-driven approaches at some point like that in the future? CASSANDRA … to understand more about plant natural products? We have sequencing facilities, DNA synthesis, metabolomics. Where do …
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… sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see …
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… really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more … in this project, the interaction with JGI was really around sequencing for, I think, for the fungus garden and some of … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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… deciphering regulatory networks, and refining experimental approaches to explore the synthesis and function of these … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … We are also utilizing DNA-Affinity Purification (DAP) sequencing to express hundreds of transcription factors and …
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… include providing technical input on large-scale production sequencing, new sequencing technologies, and related informatics; overview …
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Lake Mendota sits right next to the University of Wisconsin, … Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution that …
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… our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the … this project. But every part of this project depends on lakewater samples — so this episode is a look at how …
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… the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing …
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… and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … We have a lot more data. Obviously, there’s been a lot of sequencing going on, especially at the JGI and in other … for a sequencer. DAN: That’s right. ALISON: Or for sequencing. Yeah. DAN: For synthesis. Yeah. Yeah, these …
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… are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses … viruses can do. Building on existing virus-host prediction approaches, researchers have created a new program called … learning model in the iPHoP program creates a way of evaluating these different routes. To train the model, the …
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