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… are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses … viruses can do. Building on existing virus-host prediction approaches, researchers have created a new program called … learning model in the iPHoP program creates a way of evaluating these different routes. To train the model, the …
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… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … of what you do then? And are there ways to do data-driven approaches at some point like that in the future? CASSANDRA … to understand more about plant natural products? We have sequencing facilities, DNA synthesis, metabolomics. Where do …
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… Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two … at Monterey Bay, to be able to then do, at real time, sequencing on the underwater rover while it’s in the middle … Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes and genomes. We’re …
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… about the metabolomic data that, very nicely, with new approaches like that one push forward by Pieter Dorrestein – … this approach. DAN UDWARY: It’s really great. The other approaches of using homology, you’re only going to find the … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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… I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … UDWARY: I think that was one of the JGI’s early moves into sequencing things for the purpose of looking at the … And we sequenced the whole fosmid at the time with Sanger sequencing, and really going from the ends and sequencing, …
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… took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart. DAN: And … doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that technology. … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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… really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more … in this project, the interaction with JGI was really around sequencing for, I think, for the fungus garden and some of … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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… gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … we noticed that BiG-SCAPE was very scalable compared to approaches before that. But when you wanted to include more … families across all genomes. And the acceleration of genome sequencing, especially in bacteria, has been enormous. There …
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… started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … because – mainly it’s due to the emerging technology on DNA sequencing and synthetic biology. But also the metagenomics … decades is that today, one thing is the ability of genome sequencing. So, in the past the natural products have been …
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… optimize genetic systems. By enabling these cutting-edge approaches, the program supports transformative research to …
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… to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture …
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